I have the same issue, i ran torque with track recorder to figure out the problem.
It's fuel rail pressure.
At 4500rpms the pressure tanks and it has to rebuild that pressure which results in the stutter.
The a/f ratio is very rich, 10.2/1 at times on mine. The average is 10.5-10.7 but hits 10.2 here and there.
It needs to be leaned out like they did for the SHO v7 tunes.
11.2-11.4 would clear it up as the demand on the pump would no longer be so tough.
Another option is to add a boost a pump to get more fuel from the pump and of course you can supplement with meth.
Neither are really needed if the A/F ratio get worked out though. It's just too rich period.
Unless you plan to get more boost/mods later of course as the fuel demands would increase with more boost etc...
Watch the a/f and fuel pressure.
http://youtu.be/v8ucjbgGnXk