Just an update to my situation. I know it's been while since I last updated this.
Chronologically:
1. I had "Lou's Custom Exhaust" in Portsmouth, NH do the first manifold that went bad. I forget which one is was. I think maybe drivers side. They did a gasket and new (stainless) bolts/studs. Around $425 (IIRC).
2. A year or so later I had them to the passenger side. It was slightly less. Around $375 or so.
3. 5 months later, on a routine trip into town, the car overheats. A rear heater hose was leaning on and chafing directly against the manifold and eventually burst.
I went to Lou's and asked their thoughts if they remember removing the heat shields. The guy starte d yelling at me and cursing "like a sailor".
I (highly) suspect Lou's removed the heat shields and never replaced them. Which they deny. Even though (for a completely different reason. The notorious spark plug issue) I had before and after pics showing the heat shield in place and then gone, they still denied they ever removed them. They told me "you don't have to remove the heat shields to do the manifold or studs. Why would would we remove them if we didn't have to?, It's just more work."
I sure as hell know *I* didn't remove them, and Lou's and I are the only ones that ever worked on the vehicle. Anyway, they were very rude to me about it, using pretty rough language and sent me on my way. It's not really part of the update, but I felt worth mentioning.
4. Another 6 months passes and the drivers side starts ticking again. Same deal, cold Wx, 10-40 seconds and gone. It's been that way for a couple of years now.
My main point is: I'm done worrying about it. Life's too short. If I trade the car to a dealer, it's their issue. If I sell it privately I'll disclose fully the issue and let the prospective buyer do their own research on it and decide if they too will let it bother them or look elsewhere.
The car now has around 105k miles, I have no intentions of getting rid of it at this time. I like the vehicle.