I believe anything you do you're going to have to do a little fab work. I don't see the coil being a big problem.
The MAIN THING to do here is to get the truck tuned after you install. This is what makes your engine last. I think if you ran around 6LBS of boost with the M90, you'll see a pretty big increase, and be pretty safe. With the proper tune you can run higher than that. The higher boost pressures you go will give a smaller window for tuning mistakes. In other words running 6lbs of boost with the 4.0 SOHC has been done many times by many people, so you're safe (with a good tune). Running 10LBS of boost; well, you have to make sure everything is tuned just right. Running 15LBS of boost; you're gambling big time now and something is gonna blow on a stock internal engine. The higher you go, the bigger the gamble. It's all a gamble when you start pushing the limits.
So, with the M90 you can go up to (AN AVERAGE HERE WITH NO OTHER MODS) around maybe 240RWHP on a stock 4.0 SOHC. If you want more you'll have to start messing with pulley sizes and re-tuning. The more boost you try to get out of this blower the hotter the intake charge becomes, and the less efficient the blower is. Also, the higher the RPM you turn the blower, the more power the blower robs from your motor. Lastly, the m90 is pretty heavy and that's going to slow you down compared to other force feeding options. I know the C&M kit doesn't come with an intercooler so that's one reason why you see the lower costs for this kit.
I'm not here to talk you out of it but wanted to make sure you know the limitations. I would look into buying kabuki's m90 and kit if he still has it.