I would also recommend a dual battery setup. I have emergency lights on my truck, and I know they can be very taxing on the battery(strobes and LEDs arent bad, but I have a streethawk with 4 55w fast rotors, and about 6 55w outboard lights(takedowns, alleylights, etc) in addition to an 8lamp(27w each lamp) arrowstik) so the combined total wattage will waste your battery pretty quickly, esp if you turn your truck off while at a call. best bet would be to
A)whenever at a call, leave truck on with all non-essential accessories(siren, stereo, interior lights, etc)turned off(siren should have park-kill feature on it anyways - just to avoid confusion/chaos at the scene)
B) get a dual-battery setup with an optima red-top as your starting battery, and when on-scene, switch to yellow-top to deal with the deep-cycle reqirements which will allow you to deep cycle your battery with all the lights, but then you can switch to a starting battery when u need to leave.
if you have a dual setup, you should also upgrade the alt just because even with an isolator, its harder for the alt to charge both batteries, and will take about 2x as long to return the batteries to full charge. also, you should look into one of those "charge-guard" things, they turn your accessories off when right before your battery loses all its juice, so you will still be able to start your truck.
EDIT - I just realized that if you have a park-kill module, you could prob tap into it with a relay so that when you park your car, you could switch to the deep-cycle battery automatically. that way you wouldnt be screwed cuz u forgot to switch when u got on scene.