Gutting the stock cats is a lame way of saving some dough on high-flow cats, at the expense of suffocating other motorists, and perhaps yourself or your passengers, depending how much you drive with the windows open. For a trail-only rig it's fine, but for a vehicle thats driven on public roads, gutting or removing cats is inconsiderate at best, and illegal at worst.
I say if you think they're clogged and/or just want new cats, get a bolt-on replacement from Walker/Dynomax. They make a nice high flow setup that bolts in just like stock. Get it at NAPA or Advance auto parts, or anywhere that sells Dynomax. Consider adding a cat-back system at the same time if you don't have one already to compliment it as well.
It will increase gas mileage and power by a ton if the stocker is even a little bit clogged. If not though, theres only going to be a bit of difference, since the stock cats flow pretty good.