I went back and finessed it a little bit and it came out. Sometimes it pays to take a break and come back to it with a clear head. This valve body is very clean, well the whole trans was really clean. I think I could have just installed it and it would have worked. Although there were a couple of washers with some irregular wear so it would have been a matter of time. Also, the manual valve indexer was already installed from the previous rebuild.
On another note, I need to replace the rear main seal on the motor. This should be doable wright? Also, can the oild pan come off with the tranny out of the way or will the crossmember still be in the way. While I'm down there I want to try and get rid of some oil leaks I have.