Recent update with my X:
I been speaking with the Service Mgr at my dealership and she has been speaking with Ford and the person Cory has working my case named Alexis. So I handed in my X tonight to the Service Mgr and showed her the issue on what everyone has been reporting about the door alignment issue and she acknowledges the concern. She said what they will do is take apart the door panel and see if they could adjust it to make it fit properly and line up. She took a ruler and measured the alignment offset and see the problem. However, she cannot guarantee that once they open it up that it will be something that they can fix or adjust.
Now the other thing i noticed when I was taking pics of the pass door was the gap of the plastic cover at the beginning of the window compared to the driver. Sorry cant attach pics to show u guys.(my acct wont let me) I am not sure if that piece could be the cause of the misalignment or not but she acknowledged that too and said they will look at that as well. Does anyone else have the issue I see with the window panel?