I have included a charging system drawing that shows colors etc. Charging system problems are difficult to troubleshoot as you've discovered because of the high currents involved. A connection that appears sound with a milli or micro amp load breaks down at 40 amps.
The problem may be a simple bad connection (most common) to something more exotic like the reference voltage coming from the control panel or the fusible link. I have seen a fusible link go bad on another car I had. I don't know wher e it is on the Exploere. It can be easily checked by measuring the resistance of the cable.
Assuming that all the connectors are cleaned and they do not twist on the battery I would recommend the following steps, consult diagram and ask questions if you do not understand.
I assume a familiarity with the multimeter for measuring resistance. As these are resistance measurements zero the ohmmeter.
1. Disconnect +12 connector at battery, leave - connector on.
2. Disconnect Alternator connectors.
3. Measure resistance from - post on battery to chassis. Should read <1 ohm. If not bad neg cable or connections.
4. Measure resistance from disconnected +12 battery connector to + cable on alternator (C122). Should read <1 ohm. If not, bad fusible link or connection.
5. Measure resistance on disconnected alternator connector (C123) pin associated with Y/W wire to disconnected +12 battery connector. Should read <1 ohm, If open bad fuse 12 in PDP or connections.
6. TURN KEY TO RUN. Measure resistance on disconnected alternator connector (C123) pin associated with LG/R wire to disconnected battery +12 connector. Should read <510 ohms. If not bad, bad switch, wire in fuse panel, instrument cluster or connections.
7. There is also the C121 to C120 single pin wire on the alternator, should read zero ohms.
I think that does it, I have a 91 Navajo so if the book and your vehicle don't jive, ask questions and we'll figure it out.