@JFlynnMurphy This thread was started and ended 14 years ago.
In disregard to that, however, there is one last detail to consider when changing axles/gear ratios, and that is the speedometer reading. The vehicle speed sensor must be adjusted to accommodate any changes in gear ratio, or it will become inaccurate.
This should also be considered when changing tire size.
A Ford dealer should be able to change the settings to reflect the correct gear ratio and tire size after changes have been made. (For the record, my Explorer has had both a gear ratio change and a tire size change, and adjustment afterward.)
As I understand, there is a difference in the adjustment process between the 1997 and earlier 2nd-gens and the 1998 and later models, as the speed sensor was relocated from the transfer case to the rear axle. The 1997 donor should have the old style sensor (not sure where it would be on a 2WD) whereas the OP's 1999 should have the sensor plugged into the top of the rear differential housing.
As I understand, provided the production year and gear ratio are the same, there is no difference between any Ford Explorer 8.8 rear axles, whether from a 2WD or 4WD.