Okay, hit me again about the trans wires, I think I'll let it sink in this time. I recall you saying that before, but I still didn't take it in. The wires are 99 wires, so they match the trans, good. you used just the nine needed for the 96 MLPS, so it should be good.
Do get a 1/4" torque wrench to do those VB bolts, the specs are very important. They should be about 90-100in.lbs. as I recall. It's only light wrist pressure, a 1/4" ratchet and 8/10mm socket does well. Use your fingers and not your wrist to tighten them, if that makes sense. Put the TransGo manual valve back in, I think that was for improving resistance to internal fluid leaks, from wear.